Publications
Host Reticulocyte Redox Attenuation Creates a Protective Niche for Artemisinin Tolerance in Plasmodium falciparum
Davis C, VS L, Meloth S, Naidu R, Chu TT, Sreejith R, Vijayan K, Kumar M, Shanmugam D, Chandramohanadas R.
The Journal of Infectious Diseases (2026). Article jiag290.
Hungry for control: metabolite signaling to chromatin in Plasmodium falciparum
Lappalainen R, Kumar M, Duraisingh MT.
Current Opinion in Microbiology 78, 102430 (2024).
PI4-kinase and PfCDPK7 signaling regulate phospholipid biosynthesis in Plasmodium falciparum
Maurya R, Tripathi A, Kumar M, Antil N, Yamaryo-Botté Y, Kumar P, Bansal P, Doerig C, Botté
CY, Prasad TS K, et al.
The EMBO Reports 23(2), EMBR202154022 (2022).
Age-associated molecular changes in human hippocampus subfields as determined by
quantitative proteomics
Mol P, Chatterjee O, Gopalakrishnan L, Mangalaparthi KK, Bhat F, Kumar M, Nair B, Shankar SK, Mahadevan A, Prasad TSK.
OMICS: A Journal of Integrative Biology 26(7), 382–391 (2022).
Unraveling Toxoplasma gondii GT1 strain virulence and new protein-coding genes with
proteogenomic analyses
Antil N, Kumar M, Behera SK, Arefian M, Kotimoole CN, Rex DAB, Prasad TSK.
OMICS: A Journal of Integrative Biology 25(9), 591–604 (2021).
Protein kinase TgCDPK7 regulates vesicular trafficking and phospholipid synthesis in
Toxoplasma gondii
Bansal P, Antil N, Kumar M, Yamaryo-Botté Y, Rawat RS, Pinto S, Datta KK, Katris NJ, Botté CY, Prasad TSK, et al.
PLoS Pathogens 17(2), e1009325 (2021).
Linking nutrient sensing and gene expression in Plasmodium falciparum blood-stage
parasites
Kumar M, Skillman K, Duraisingh MT.
Molecular Microbiology 115(5), 891–900 (2021).
Deep proteome profiling of semen of Indian indigenous Malnad Gidda (Bos indicus) cattle
Ramesha KP, Mol P, Kannegundla U, Thota LN, Gopalakrishnan L, Rana E, Azharuddin N, Mangalaparthi KK, Kumar M, Dey G, et al.
Journal of Proteome Research 19(8), 3364–3376 (2020).
Human muscle pathology is associated with altered phosphoprotein profile of mitochondrial proteins in the skeletal muscle
Sunitha B, Kumar M, Gowthami N, Unni S, Gayathri N, Prasad TSK, Nalini A, Polavarapu K, Vengalil S, Preethish-Kumar V, et al.
Journal of Proteomics 211, 103556 (2020).
Proteomics dataset of adult Anopheles stephensi female brain
Dey G, Mohanty AK, Sreenivasamurthy SK, Kumar M, Kumar A, Prasad TSK.
Data in Brief 32, 106243 (2020).
Global proteome profiling reveals drug-resistant traits in Elizabethkingia meningoseptica:
an opportunistic nosocomial pathogen
Agrawal A, Ravikumar R, Varun CN, Kumar M, Chatterjee O, Advani J, Gopalakrishnan L,Nagaraj S, Mohanty V, Patil AH, et al.
​OMICS: A Journal of Integrative Biology 23(6), 318–326 (2019).
Proteomics of Asrij perturbation in Drosophila lymph glands for identification of new
regulators of hematopoiesis
Sinha S, Ray A, Abhilash L, Kumar M, Sreenivasamurthy SK, Prasad TSK, Inamdar MS.
Molecular & Cellular Proteomics 18(6), 1171–1182 (2019).
MAP2K1 is a potential therapeutic target in erlotinib resistant head and neck squamous
cell carcinoma
Jain AP, Patel K, Pinto S, Radhakrishnan A, Nanjappa V, Kumar M, Raja R, Patil AH, Kumari A,Manoharan M, et al.
Scientific Reports 9, 18793 (2019).
Quantitative mass spectrometric analysis to unravel glycoproteomic signature of follicular
fluid in women with polycystic ovary syndrome
Patil K, Yelamanchi S, Kumar M, Hinduja I, Prasad TSK, Gowda H, Mukherjee S.
PLoS ONE 14(4), e0214742 (2019).
Dataset on fat body proteome of Anopheles stephensi Liston
Kumar M, Mohanty AK, Dey G, Sreenivasamurthy SK, Kumar A, Prasad K.
​Data in Brief 22, 1068–1073 (2019).
Proteome data of female Anopheles stephensi antennae
Mohanty AK, Dey G, Kumar M, Sreenivasamurthy SK, Garg S, Prasad TSK, Kumar A.
Data in Brief 24, 103911 (2019).
Mapping the protein phosphorylation sites in human mitochondrial complex I (NADH:
Ubiquinone oxidoreductase): A bioinformatics study with implications for brain aging and
neurodegeneration
Gowthami N, Sunitha B, Kumar M, Prasad TSK, Gayathri N, Padmanabhan B, Bharath MMS.
Journal of Chemical Neuroanatomy 95, 13–28 (2019).
Identification of host-response in cerebral malaria patients using quantitative proteomic
analysis
Kumar M, Varun CN, Dey G, Ravikumar R, Mahadevan A, Shankar SK, Prasad TSK.
PROTEOMICS – Clinical Applications 12(4), 1600187 (2018).
Proteomic approach and expression analysis revealed the differential expression of
predicted leptospiral proteases capable of ECM degradation
Dhandapani G, Sikha T, Pinto SM, Kumar MK, Patel K, Kumar M, Kumar V, Tennyson J,Satheeshkumar PK, Gowda H, et al.
​
PROTEOMICS – Clinical Applications 12(4), 1600187 (2018).
Bovine milk comparative proteome analysis from early, mid, and late lactation in the cattle
breed, Malnad Gidda (Bos indicus)
Mol P, Kannegundla U, Dey G, Gopalakrishnan L, Dammalli M, Kumar M, Patil AH, Basavaraju M, Rao A, Ramesha KP, et al.
OMICS: A Journal of Integrative Biology 22(3), 223–235 (2018).
Proteomics of the human olfactory tract
Dammalli M, Dey G, Kumar M, Madugundu AK, Gopalakrishnan L, Gowrishankar BS,Mahadevan A, Shankar SK, Prasad TSK.
OMICS: A Journal of Integrative Biology 22(1), 77–87 (2018).
Proteome data of Anopheles stephensi salivary glands using high-resolution mass
spectrometry analysis
Dey G, Mohanty AK, Sreenivasamurthy SK, Kumar M, Prasad TSK, Kumar A.
Data in Brief 21, 2554–2561 (2018).
Mapping the protein phosphorylation sites in human mitochondrial complex I (NADH:
Ubiquinone oxidoreductase): A bioinformatics study with implications for brain aging and
neurodegeneration
Gowthami N, Sunitha B, Kumar M, Prasad TSK, Gayathri N, Padmanabhan B, Bharath MMS.
Journal of Chemical Neuroanatomy 95, 13–28 (2019).
Identification of host-response in cerebral malaria patients using quantitative proteomic
analysis
Kumar M, Varun CN, Dey G, Ravikumar R, Mahadevan A, Shankar SK, Prasad TSK.
​PROTEOMICS – Clinical Applications 12(4), 1600187 (2018).
Proteomic approach and expression analysis revealed the differential expression of
predicted leptospiral proteases capable of ECM degradation
Dhandapani G, Sikha T, Pinto SM, Kumar MK, Patel K, Kumar M, Kumar V, Tennyson J,Satheeshkumar PK, Gowda H, et al.
BBA – Proteins and Proteomics 1866(5–6), 712–721 (2018).
Bovine milk comparative proteome analysis from early, mid, and late lactation in the cattle
breed, Malnad Gidda (Bos indicus)
Mol P, Kannegundla U, Dey G, Gopalakrishnan L, Dammalli M, Kumar M, Patil AH, Basavaraju M, Rao A, Ramesha KP, et al.
OMICS: A Journal of Integrative Biology 22(3), 223–235 (2018).
Proteomics of the human olfactory tract
Dammalli M, Dey G, Kumar M, Madugundu AK, Gopalakrishnan L, Gowrishankar BS, Mahadevan A, Shankar SK,Prasad TSK.
OMICS: A Journal of Integrative Biology 22(1), 77–87 (2018).
Proteome data of Anopheles stephensi salivary glands using high-resolution mass
spectrometry analysis
Dey G, Mohanty AK, Sreenivasamurthy SK, Kumar M, Prasad TSK, Kumar A.
Data in Brief 21, 2554–2561 (2018).
Proteome data of Anopheles stephensi salivary glands using high-resolution mass
spectrometry analysis
Dey G, Mohanty AK, Sreenivasamurthy SK, Kumar M, Prasad TSK, Kumar A.
Data in Brief 21, 2554–2561 (2018).
Quantitative proteome of midgut, Malpighian tubules, ovaries and fat body from sugar-fed
adult Anopheles stephensi mosquitoes
Sreenivasamurthy SK, Dey G, Kumar M, Mohanty AK, Kumar A, Prasad TSK.
Data in Brief 20, 1861–1866 (2018).
Proteome data of Anopheles stephensi ovary using high-resolution mass spectrometry
Dey G, Mohanty AK, Kumar M, Sreenivasamurthy SK, Patil AH, Prasad TSK, Kumar A.
​Data in Brief 20, 723–731 (2018).
Proteome data of Anopheles stephensi ovary using high-resolution mass spectrometry
Dey G, Mohanty AK, Kumar M, Sreenivasamurthy SK, Patil AH, Prasad TSK, Kumar A.
​Data in Brief 20, 723–731 (2018).
Proteome data of Anopheles stephensi hemolymph using high-resolution mass
spectrometry
Dey G, Mohanty AK, Kumar M, Sreenivasamurthy SK, Kumar A, Prasad TSK.
Data in Brief 18, 1441–1447 (2018).
Mapping Anopheles stephensi midgut proteome using high-resolution mass spectrometry
Mohanty AK, Dey G, Kumar M, Sreenivasamurthy SK, Garg S, Prasad TSK, Kumar A.
Data in Brief 17, 1295–1303 (2018).
Mitochondrial dysfunction in human skeletal muscle biopsies of lipid storage disorder
Bandopadhyay D, Kumar M, Prasad TSK, Natarajan A, Christopher R, Nalini A, Bindu PS,Gayathri N, Srinivas Bharath MM.
Journal of Neurochemistry 145(4), 323–341 (2018).
Response to blood meal in the fat body of Anopheles stephensi using quantitative
proteomics: Toward new vector control strategies against malaria
Kumar M, Mohanty AK, Sreenivasamurthy SK, Dey G, Advani J, Pinto SM, Kumar A, Prasad
OMICS: A Journal of Integrative Biology 21(9), 520–530 (2017).
PfCDPK1 mediated signaling in erythrocytic stages of Plasmodium falciparum
Kumar S, Kumar M, Ekka R, Dvorin JD, Paul AS, Madugundu AK, Gilberger T, Gowda H,Duraisingh MT, Keshava Prasad TS, et al.
Nature Communications 8, 63 (2017).
Integrating transcriptomic and proteomic data for accurate assembly and annotation of
genomes
Prasad TSK, Mohanty AK, Kumar M, Sreenivasamurthy SK, Dey G, Nirujogi RS, Pinto SM,Madugundu AK, Patil AH, Advani J, et al.
Genome Research 27(1), 133 (2017).
Mosquito-borne diseases and omics: tissue-restricted expression and alternative splicing
revealed by transcriptome profiling of Anopheles stephensi
Sreenivasamurthy SK, Madugundu AK, Patil AH, Dey G, Mohanty AK, Kumar M, Patel K, Wang
C, Kumar A, Pandey A, et al.
OMICS: A Journal of Integrative Biology 21(8), 488–497 (2017).
Proteomic analysis of the human olfactory bulb
Dammalli M, Dey G, Madugundu AK, Kumar M, Rodrigues B, Gowda H, Siddaiah BG,Mahadevan A, Shankar SK, Prasad TSK.
OMICS: A Journal of Integrative Biology 21(8), 440–453 (2017).
Quantitative proteomic and phosphoproteomic analysis of H37Ra and H37Rv strains of
Mycobacterium tuberculosis
Verma R, Pinto SM, Patil AH, Advani J, Subba P, Kumar M, Sharma J, Dey G, Ravikumar R,Buggi S, et al.
Journal of Proteome Research 16(4), 1632–1645 (2017).
Mosquito-borne diseases and omics: salivary gland proteome of the female Aedes aegypti
mosquito
Dhawan R, Kumar M, Mohanty AK, Dey G, Advani J, Prasad TSK, Kumar A.
OMICS: A Journal of Integrative Biology 21(1), 45–54 (2017).
Data from salivary gland proteome analysis of female Aedes aegypti Linn
Dhawan R, Mohanty AK, Kumar M, Dey G, Advani J, Prasad TSK, Kumar A.
​Data in Brief 13, 274–277 (2017).
Characterization of human pineal gland proteome
Yelamanchi SD, Kumar M, Madugundu AK, Gopalakrishnan L, Dey G, Chavan S, Sathe G,
Mathur PP, Gowda H, Mahadevan A, et al.
​Molecular BioSystems 12(12), 3622–3632 (2016).
Muscle biopsies from human muscle diseases with myopathic pathology reveal common
alterations in mitochondrial function
Sunitha B, Gayathri N, Kumar M, Prasad TSK, Nalini A, Padmanabhan B, Srinivas Bharath MM.
​Journal of Neurochemistry 138(1), 174–191 (2016).
A draft map of the human proteome
Kim MS, Pinto SM, Getnet D, Nirujogi RS, Manda SS, Chaerkady R, Madugundu AK, Kelkar DS,Isserlin R, Jain S, ThomasJK, Muthusamy B, Leal-Rojas P, Praveen Kumar, Sahasrabuddhe NA,Balakrishnan L, Advani J, George B, Renuse S, Selvan LDN, Patil AH, Nanjappa V,Radhakrishnan A, Prasad S, Subbannayya T, Raju R, Kumar M, Sreenivasamurthy SK, et al.
Nature 509(7502), 575–581 (2014).
A compendium of molecules involved in vector-pathogen interactions pertaining to malaria
Sreenivasamurthy SK, Dey G, Ramu M, Kumar M, Gupta MK, Mohanty AK, Harsha HC, Sharma P, Kumar N, Pandey A, et al.
Malaria Journal 12, 216 (2013).